Basic Information
Locus ID:
Chr02G028940
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000002 | 60478807 | 60482475 | + | Chr02G028940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 693 | 971 | 5.32539E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 689 | 971 | 1.7E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 64 | 4.1E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 501 | 561 | 4.9E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 289 | 349 | 2.8E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 73 | 130 | 1.1E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 305 | 586 | 5.96E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 678 | 972 | 7.01E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 398 | 9.52E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 670 | 774 | 1.1E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 143 | 3.2E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 380 | 1.7E-60 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 775 | 989 | 3.8E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 381 | 627 | 2.7E-50 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 523 | 547 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 311 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 687 | 978 | 7.6E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 216 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 312 | 335 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 217 | 240 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 336 | 360 | 82.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 687 | 973 | 37.389389 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 693 | 724 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 823 | 835 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 523 | 536 | 1.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 96 | 109 | 1.2E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 987 | 1024 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 999 | 1024 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025811826.1 | receptor-like protein kinase 5 [Panicum hallii] | 0 |
| G7JIK2 | Leucine-rich repeat receptor-like kinase protein SUNN OS=Medicago truncatula OX=3880 GN=SUNN PE=1 SV=2 | 0 | |
| TrEMBL | A0A3L6PFC2 | Receptor-like protein kinase 5 OS=Panicum miliaceum OX=4540 GN=C2845_PM10G14480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology