Basic Information
Locus ID:
Chr02G020440
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
UBC3
Description:
Ubiquitin-conjugating enzyme E2, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000002 | 44753779 | 44757525 | + | Chr02G020440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 2 | 121 | 8.2527E-37 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 55 | 120 | 1.1E-18 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 2 | 28 | 6.7E-6 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 3 | 124 | 6.21E-27 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 127 | 4.0E-35 | IPR016135 |
| SMART | SM00212 | ubc_7 | 1 | 126 | 7.4E-8 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 126 | 28.040951 | IPR000608 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_021644685.1 | ubiquitin-conjugating enzyme E2 2-like isoform X1 [Hevea brasiliensis] | 0 |
| P25866 | Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum OX=4565 GN=UBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J9B4Q1 | UBC core domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_023423 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Chr02G020440.