Basic Information
Locus ID:
Chr02G017430
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000002 | 28292442 | 28297425 | - | Chr02G017430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 207 | 239 | 3.30109E-7 | - |
| Pfam | PF07645 | Calcium-binding EGF domain | 207 | 248 | 2.7E-6 | IPR001881 |
| Pfam | PF00069 | Protein kinase domain | 318 | 580 | 1.1E-47 | IPR000719 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 207 | 241 | 2.55E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 316 | 584 | 1.75E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 392 | 591 | 1.9E-53 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 159 | 243 | 1.1E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 304 | 391 | 1.2E-22 | - |
| SMART | SM00179 | egfca_6 | 207 | 249 | 5.2E-9 | IPR001881 |
| SMART | SM00181 | egf_5 | 158 | 206 | 3.5 | IPR000742 |
| SMART | SM00220 | serkin_6 | 315 | 585 | 3.5E-33 | IPR000719 |
| SMART | SM00181 | egf_5 | 210 | 249 | 0.018 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 207 | 244 | 8.562168 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 315 | 585 | 37.389389 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 207 | 232 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 321 | 345 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 436 | 448 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 223 | 234 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_008648576.2 | wall-associated receptor kinase 2 [Zea mays] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A804PSA4 | Protein kinase domain-containing protein OS=Zea mays OX=4577 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology