Basic Information
Locus ID:
Chr02G011660
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000002 | 13816653 | 13820009 | + | Chr02G011660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 90 | 217 | 8.15747E-39 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 90 | 217 | 1.5E-20 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 75 | 217 | 1.83E-36 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 69 | 217 | 4.6E-44 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 90 | 218 | 1.4E-28 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 79 | 218 | 42.223099 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 258 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73040.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_004969699.1 | jacalin-related lectin 19 isoform X1 [Setaria italica] | 0 |
| Q9SSM3 | Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SWJ0 | Jacalin-type lectin domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_51180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology