Basic Information
Locus ID:
Chr02G011460
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
CBL10
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000002 | 13394391 | 13398701 | - | Chr02G011460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 127 | 188 | 5.6796E-7 | IPR002048 |
| CDD | cd00051 | EFh | 163 | 232 | 6.55138E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 161 | 231 | 1.5E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 80 | 257 | 1.49E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 65 | 265 | 1.4E-62 | - |
| SMART | SM00054 | efh_1 | 126 | 154 | 2.9 | IPR002048 |
| SMART | SM00054 | efh_1 | 163 | 191 | 1.0 | IPR002048 |
| SMART | SM00054 | efh_1 | 207 | 235 | 0.012 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 122 | 157 | 10.691735 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 159 | 194 | 12.393354 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 203 | 238 | 11.472807 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 216 | 228 | - | IPR018247 |
| PRINTS | PR00450 | Recoverin family signature | 177 | 195 | 8.1E-7 | - |
| PRINTS | PR00450 | Recoverin family signature | 130 | 151 | 8.1E-7 | - |
| PRINTS | PR00450 | Recoverin family signature | 223 | 243 | 8.1E-7 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33000.2 | calcineurin B-like protein 10. Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis. In the shoot SCABP recruits the protein kinase SOS2 to the plasma membrane. SCABP is partially redundant with SOS3 but neither protein can fully complement the loss of the other protein. | 0 |
| RefSeq | XP_052165760.1 | calcineurin B-like protein 10 [Oryza glaberrima] | 0 |
| Q3HRN7 | Calcineurin B-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9B417 | Calcineurin B-like protein OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology