Basic Information
Locus ID:
Chr02G009070
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000002 | 9983521 | 9987221 | + | Chr02G009070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 405 | 503 | 1.2E-5 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 365 | 542 | 4.32E-16 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 311 | 521 | 7.9E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 275 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039815011.1 | uncharacterized protein LOC120677882 [Panicum virgatum] | 0 |
| TrEMBL | A0A8T0WMH6 | ULP_PROTEASE domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_1NG117419 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 9 | AH01.1897, AH04.860, AH07.1629, BH04.533, BH04.967, BH07.812 ... |
| Poaceae | Oryza coarctata | 6 | Oco03G009010, Oco05G016430, Oco09G004560, Oco10G016000 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os06g28030.1 |
| Poaceae | Sporobolus alterniflorus | 13 | Chr02G009070, Chr06G027180, Chr06G027640, Chr08G004160 ... |
| Poaceae | Zea mays | 1 | Zm00001eb262950_P001 |