Basic Information
Locus ID:
Chr02G006150
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000002 | 6220618 | 6224780 | + | Chr02G006150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 201 | 448 | 8.1E-23 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 158 | 457 | 3.12E-41 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 152 | 255 | 3.8E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 257 | 460 | 1.5E-36 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 174 | 451 | 21.290764 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 44 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G08760.1 | Protein kinase superfamily protein. Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants. | 0 |
| RefSeq | XP_002458687.1 | probable serine/threonine-protein kinase PBL1 [Sorghum bicolor] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VLJ8 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_18590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg14698, jg3170 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_20420 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah031493 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g157240 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg2181, Sbi_jg34333 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2591 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005910 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl71093, Sgl74667 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000008485, gene:ENSEOMG00000034893 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7AG0022820, CQ.Regalona.r1.7BG0025410 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30269140 |
| Apiaceae | Apium graveolens | 3 | Ag5G02813, Ag8G00027, Ag8G00028 |
| Arecaceae | Cocos nucifera | 3 | COCNU_04G004610, COCNU_12G006250, COCNU_16G005780 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103706258, gene-LOC103708903, gene-LOC103720401 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.368.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri9G33743 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G08760.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10020426m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g07180.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g055790.2N, BniB07g058530.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0890 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0907 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g16730 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g31310, gene.Thate06g03700 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-4872 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.873 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00002598 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G08990, Lb2G08993 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.3703, BH02.3257, CH02.3985 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0038100, gene-QOZ80_1BG0088110 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0297620.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_055671 |
| Poaceae | Oryza coarctata | 2 | Oco01G023520, Oco02G024280 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g60700.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G319000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0601818, Pt_Chr0601846 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G006150, Chr03G018910, Chr05G027230, Chr08G023060 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G550800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG049650, gene_TRIDC3BG055890 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G344400.2, TraesCS3B02G376300.2 ... |
| Poaceae | Zea mays | 4 | Zm00001eb037560_P001, Zm00001eb149520_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-11564, nbis-gene-31456 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g11427, Zma_g8899 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.878, evm.TU.LG15.785 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g33260 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.1917, evm.TU.Scaffold_2_RagTag.543 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-4653, nbisL1-mrna-5684 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-2089, nbisL1-mrna-9497 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-3615, nbisL1-mrna-9646 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000009l.629, evm.TU.utg000016l.759 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00005724, Maker00017161 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-2629, nbisL1-mrna-4895 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-13851, nbisL1-mrna-16620 |
| Salicaceae | Populus euphratica | 2 | populus_peu11508, populus_peu25269 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132606732, gene-LOC132631072 |
| Solanaceae | Solanum chilense | 2 | SOLCI004260300, SOLCI005576400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107031727, gene-LOC107031856 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.1663_chr01_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G0989 |
| Zosteraceae | Zostera marina | 1 | Zosma01g19380.v3.1 |