Basic Information
Locus ID:
Chr02G005250
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
DNAJ heat shock N-terminal domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000002 | 5293053 | 5296919 | - | Chr02G005250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 2.02332E-18 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 3.2E-20 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 520 | 726 | 8.8E-78 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 61 | 133 | 1.22E-22 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 56 | 153 | 1.9E-24 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 1.8E-21 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 17.862194 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 6.3E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 6.3E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 6.3E-12 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 489 | 515 | - | - |
| Coils | Coil | Coil | 445 | 465 | - | - |
| Coils | Coil | Coil | 323 | 346 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_034604532.1 | uncharacterized protein LOC117864510 [Setaria viridis] | 0 |
| B3WEQ6 | Chaperone protein DnaJ OS=Lacticaseibacillus casei (strain BL23) OX=543734 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A4U6TRV8 | J domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G130900v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology