Basic Information
Locus ID:
Chr02G000240
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000002 | 212558 | 215054 | + | Chr02G000240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 69 | 155 | 4.34414E-32 | - |
| Pfam | PF00855 | PWWP domain | 69 | 152 | 4.0E-13 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 63 | 181 | 4.57E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 58 | 162 | 3.3E-21 | - |
| SMART | SM00293 | PWWP_4 | 69 | 130 | 1.9E-7 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 71 | 132 | 13.201664 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 681 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 436 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021312812.1 | uncharacterized protein LOC110433943 [Sorghum bicolor] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VNP3 | PWWP domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_19031 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology