Basic Information
Locus ID:
Chr01G038910
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 72991167 | 72992074 | - | Chr01G038910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 162 | 198 | 4.69219E-17 | - |
| Pfam | PF01849 | NAC domain | 61 | 116 | 3.2E-21 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 160 | 198 | 3.4E-12 | IPR044034 |
| Gene3D | G3DSA:2.20.70.30 | - | 67 | 120 | 1.1E-30 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 160 | 197 | 7.7E-19 | - |
| SMART | SM01407 | NAC_2 | 61 | 117 | 1.5E-24 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 58 | 123 | 17.74539 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 68 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49470.1 | nascent polypeptide-associated complex subunit alpha-like protein 2. | 0 |
| RefSeq | XP_039829624.1 | nascent polypeptide-associated complex subunit alpha-like protein 2 [Panicum virgatum] | 0 |
| Q94JX9 | Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9WMU1 | NAC-A/B domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_08225 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology