Basic Information
Locus ID:
Chr01G037400
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 71684244 | 71687343 | + | Chr01G037400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 472 | 491 | 0.93 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 601 | 792 | 8.3E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 595 | 858 | 2.6E-50 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 215 | 534 | 4.42E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 293 | 4.08E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 464 | 540 | 2.0E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 286 | 2.0E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 189 | 2.7E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 463 | 1.2E-45 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 589 | 677 | 1.3E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 678 | 880 | 1.2E-49 | - |
| SMART | SM00220 | serkin_6 | 599 | 877 | 1.8E-12 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 27 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 599 | 884 | 27.792404 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 708 | 720 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 242 | 255 | 9.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 469 | 482 | 9.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_034575566.1 | MDIS1-interacting receptor like kinase 1-like [Setaria viridis] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6T8P3 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G546800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology