Basic Information
Locus ID:
Chr01G034680
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 68979499 | 68982387 | + | Chr01G034680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 133 | 169 | 1.00182E-16 | - |
| Pfam | PF01849 | NAC domain | 30 | 85 | 1.2E-21 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 131 | 169 | 8.0E-12 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 131 | 168 | 3.1E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 36 | 89 | 8.3E-31 | IPR038187 |
| SMART | SM01407 | NAC_2 | 30 | 86 | 5.1E-25 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 2 | 170 | 2.7E-58 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 27 | 92 | 17.312428 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 134 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_004984363.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Setaria italica] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WGF0 | NAC-A/B domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_06602 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology