Basic Information
Locus ID:
Chr01G033850
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 67900213 | 67905374 | + | Chr01G033850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 648 | 913 | 2.54191E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 646 | 911 | 5.3E-46 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 408 | 5.78E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 627 | 923 | 1.37E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 198 | 4.5E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 418 | 5.9E-36 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 614 | 717 | 4.4E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 718 | 937 | 1.8E-55 | - |
| SMART | SM00220 | serkin_6 | 642 | 915 | 7.4E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 642 | 916 | 38.20916 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 762 | 774 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 648 | 670 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 923 | 959 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_012698411.2 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Setaria italica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WGP1 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_06792 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology