Basic Information
Locus ID:
Chr01G032570
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 65612427 | 65617883 | - | Chr01G032570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01366 | KISc_C_terminal | 402 | 724 | 5.44664E-164 | - |
| Pfam | PF00225 | Kinesin motor domain | 432 | 721 | 3.0E-103 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 44 | 164 | 4.5E-15 | IPR001715 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 42 | 177 | 2.09E-24 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 404 | 755 | 6.71E-118 | IPR027417 |
| Gene3D | G3DSA:1.10.418.10 | - | 29 | 181 | 3.1E-29 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 399 | 764 | 4.1E-130 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 402 | 730 | 8.5E-164 | IPR001752 |
| SMART | SM00033 | ch_5 | 44 | 163 | 1.7E-10 | IPR001715 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 42 | 165 | 18.45755 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 404 | 722 | 120.124077 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 592 | 609 | 2.9E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 476 | 497 | 2.9E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 623 | 641 | 2.9E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 672 | 693 | 2.9E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 911 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 949 | 1015 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 971 | 1015 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 924 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 776 | - | - |
| Coils | Coil | Coil | 261 | 281 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47500.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_034573271.1 | kinesin-like protein KIN-14F [Setaria viridis] | 0 |
| Q10MN5 | Kinesin-like protein KIN-14F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14F PE=2 SV=2 | 0 | |
| TrEMBL | A0A811MAA6 | Kinesin-4 OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS1506 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology