Basic Information
Locus ID:
Chr01G030030
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 61442212 | 61450671 | - | Chr01G030030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 411 | 651 | 5.23878E-48 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 411 | 661 | 5.7E-40 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 195 | 313 | 2.7E-26 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 737 | 933 | 2.6E-34 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 1 | 122 | 3.3E-21 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 571 | 758 | 1.87E-42 | IPR013320 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 410 | 653 | 7.04E-37 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 711 | 968 | 3.78E-61 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 32 | 228 | 1.42E-26 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 163 | 378 | 1.48E-48 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 802 | 976 | 3.4E-45 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 409 | 650 | 4.8E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 161 | 335 | 1.6E-48 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 126 | 6.3E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 719 | 801 | 1.8E-20 | - |
| SMART | SM00220 | serkin_6 | 173 | 385 | 3.2E-10 | IPR000719 |
| SMART | SM00220 | serkin_6 | 735 | 963 | 4.9E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 735 | 976 | 28.965525 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 173 | 473 | 21.333166 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 282 | 294 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 741 | 764 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53810.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_034570979.1 | L-type lectin-domain containing receptor kinase SIT1-like [Setaria viridis] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1E5WHA8 | L-type lectin-domain containing receptor kinase IV.2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002217 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Chr01G030030.