Basic Information
Locus ID:
Chr01G028160
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 58310396 | 58313920 | + | Chr01G028160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 385 | 648 | 4.07747E-85 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 64 | 2.1E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 382 | 641 | 3.5E-32 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 80 | 127 | 8.4E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 141 | 163 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 212 | 1.74E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 643 | 3.46E-54 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 350 | 453 | 5.8E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 454 | 664 | 2.7E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 136 | 221 | 8.8E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 135 | 2.3E-28 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 379 | 653 | 29.33301 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 385 | 407 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_039779240.1 | probable inactive receptor kinase At1g48480 [Panicum virgatum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6DBM5 | Putative inactive receptor kinase RLK902 OS=Zea mays OX=4577 GN=RLK902_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology