Basic Information
Locus ID:
Chr01G028150
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 58180212 | 58209807 | - | Chr01G028150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 653 | 811 | 3.3E-19 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 354 | 614 | 3.3E-41 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 43 | 303 | 1.1E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 629 | 838 | 2.16E-49 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 330 | 618 | 4.45E-67 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 309 | 1.89E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 115 | 332 | 3.2E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 626 | 833 | 5.3E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 333 | 424 | 8.0E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 21 | 113 | 1.1E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 426 | 625 | 7.2E-49 | - |
| SMART | SM00220 | serkin_6 | 648 | 850 | 4.9E-11 | IPR000719 |
| SMART | SM00220 | serkin_6 | 38 | 309 | 2.1E-18 | IPR000719 |
| SMART | SM00220 | serkin_6 | 349 | 620 | 2.7E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 349 | 620 | 33.078522 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 309 | 32.371822 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 648 | 854 | 20.244848 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 472 | 484 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 654 | 676 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 161 | 173 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 355 | 377 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 0 |
| RefSeq | XP_044327523.1 | wall-associated receptor kinase-like 6 [Triticum aestivum] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 0 | |
| TrEMBL | M8C2B3 | Wall-associated receptor kinase 2 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | CH04.1869, CH05.2817 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0375270, gene-QOZ80_9AG0685500 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0325550.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco22G008390 |
| Poaceae | Oryza sativa | 8 | LOC_Os10g02360.1, LOC_Os10g05250.1, LOC_Os10g05400.1 ... |
| Poaceae | Paspalum vaginatum | 13 | gene-BS78_05G166100, gene-BS78_05G166500, gene-BS78_K038600 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0600798 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G028150, Chr07G016140, Chr16G005860, Chr16G005880 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G153000, Tel7E01G297400 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2BG007840, gene_TRIDC3AG072500 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS2B02G075200.1, TraesCS3B02G579200.1.cds1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb114030_P001, Zm00001eb114060_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-44241 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g18068, Zma_g18069 |