Basic Information
Locus ID:
Chr01G025570
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 51976135 | 51981421 | + | Chr01G025570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 427 | 695 | 3.81534E-86 | - |
| Pfam | PF13855 | Leucine rich repeat | 155 | 215 | 5.8E-12 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 692 | 1.4E-39 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 80 | 1.6E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 692 | 3.42E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 252 | 1.09E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 720 | 4.8E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 265 | 7.6E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 385 | 498 | 1.0E-24 | - |
| SMART | SM00369 | LRR_typ_2 | 154 | 177 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 224 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 131 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 178 | 201 | 8.9 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 695 | 34.98661 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 24 | 9.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 204 | 226 | 7.557941 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 427 | 450 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_025795857.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Panicum hallii] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3ITK9 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G579600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology