Basic Information
Locus ID:
Chr01G024660
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 49383571 | 49387484 | - | Chr01G024660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 95 | 252 | 2.7E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 284 | 423 | 1.3E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 126 | 269 | 8.7E-17 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 273 | 427 | 1.7E-18 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 63 | 426 | 7.5E-122 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 77 | 426 | 3.8E-105 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_025793370.1 | vacuolar cation/proton exchanger 2 isoform X2 [Panicum hallii] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9WFM4 | Vacuolar cation/proton exchanger OS=Eragrostis curvula OX=38414 GN=EJB05_06207 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology