Basic Information
Locus ID:
Chr01G023680
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 45733752 | 45748957 | - | Chr01G023680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 354 | 409 | 3.9E-23 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 522 | 578 | 4.8E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 351 | 412 | 2.22E-24 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 513 | 581 | 3.53E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 341 | 413 | 1.3E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 506 | 582 | 5.8E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 353 | 411 | 1.7E-31 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 521 | 580 | 1.0E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 348 | 412 | 23.548243 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 516 | 581 | 37.171917 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 584 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 358 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_008657198.2 | probable WRKY transcription factor 4 [Zea mays] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | C5WVP7 | WRKY transcription factor 3 OS=Sorghum bicolor OX=4558 GN=SORBI_3001G332500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology