Basic Information
Locus ID:
Chr01G022300
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 36446811 | 36452666 | - | Chr01G022300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 614 | 879 | 1.25099E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 64 | 2.6E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 609 | 876 | 3.0E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 594 | 917 | 3.55E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 63 | 400 | 3.85E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 285 | 1.9E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 581 | 683 | 1.9E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 186 | 8.2E-47 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 684 | 897 | 2.0E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 410 | 2.1E-15 | IPR032675 |
| SMART | SM00220 | serkin_6 | 608 | 881 | 1.8E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 608 | 881 | 37.785141 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 243 | 265 | 7.018892 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 266 | 288 | 7.665751 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 728 | 740 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 614 | 636 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034587246.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Setaria viridis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6VTH9 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G299800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology