Basic Information
Locus ID:
Chr01G019820
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 27776397 | 27778987 | + | Chr01G019820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 183 | 449 | 1.33209E-103 | - |
| Pfam | PF00069 | Protein kinase domain | 180 | 446 | 1.6E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 157 | 451 | 7.96E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 253 | 460 | 1.2E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 151 | 252 | 1.9E-31 | - |
| SMART | SM00220 | serkin_6 | 177 | 454 | 1.9E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 177 | 454 | 38.322235 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 299 | 311 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 183 | 205 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 486 | - | - |
| Coils | Coil | Coil | 197 | 217 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039800860.1 | probable serine/threonine-protein kinase At1g01540 [Panicum virgatum] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T0U9V8 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG140771 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology