Basic Information
Locus ID:
Chr01G018940
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 25840595 | 25846121 | - | Chr01G018940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 261 | 347 | 7.62811E-30 | - |
| Pfam | PF00855 | PWWP domain | 261 | 348 | 4.8E-20 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 257 | 366 | 2.53E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 256 | 356 | 6.9E-25 | - |
| SMART | SM00293 | PWWP_4 | 261 | 322 | 3.2E-11 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 263 | 324 | 15.392666 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1133 | 1153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1465 | 1501 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 967 | 988 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1382 | 1409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1326 | 1344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 852 | 875 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1351 | 1367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 732 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1317 | 1413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 498 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_025806246.1 | uncharacterized protein LOC112884854 [Panicum hallii] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6T0V1 | PWWP domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G35370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology