Basic Information
Locus ID:
Chr01G018820
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
CPK13
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 25735023 | 25739049 | + | Chr01G018820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 445 | 507 | 1.55338E-19 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 67 | 325 | 2.53617E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 68 | 326 | 1.0E-72 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 444 | 507 | 3.3E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 372 | 432 | 2.2E-11 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 333 | 9.31E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 354 | 532 | 1.89E-45 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 70 | 153 | 2.0E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 335 | 510 | 3.6E-54 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 334 | 1.9E-60 | - |
| SMART | SM00054 | efh_1 | 409 | 437 | 1.2 | IPR002048 |
| SMART | SM00220 | serkin_6 | 68 | 326 | 2.4E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 373 | 401 | 1.4E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 445 | 473 | 8.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 481 | 509 | 3.4E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 477 | 512 | 14.569197 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 369 | 404 | 16.800829 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 326 | 46.576488 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 441 | 476 | 14.652882 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 382 | 394 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 490 | 502 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 188 | 200 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 454 | 466 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 74 | 97 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 46 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_039840903.1 | uncharacterized protein LOC120700731 [Panicum virgatum] | 0 |
| Q8LPZ7 | Calcium-dependent protein kinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6SUI9 | Calcium-dependent protein kinase 30 OS=Panicum miliaceum OX=4540 GN=C2845_PM05G35160 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology