Basic Information
Locus ID:
Chr01G014880
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 20681461 | 20683429 | + | Chr01G014880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 29 | 159 | 5.33025E-51 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 29 | 159 | 5.9E-29 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 18 | 159 | 4.06E-44 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 6 | 159 | 1.2E-57 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 29 | 160 | 5.3E-37 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 18 | 160 | 49.370049 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73040.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_039837307.1 | jacalin-related lectin 19-like isoform X1 [Panicum virgatum] | 0 |
| Q9SSM3 | Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9U9M3 | Jacalin-type lectin domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_36640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology