Basic Information
Locus ID:
Chr01G012190
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 17716312 | 17720745 | + | Chr01G012190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 665 | 913 | 1.40116E-129 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1058 | 1322 | 6.2E-126 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 696 | 832 | 1.4E-23 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 693 | 831 | 4.42E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 666 | 916 | 3.9E-59 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 575 | 1327 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 693 | 922 | 30.228085 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 495 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 518 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 194 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_002440611.1 | translocase of chloroplast 159, chloroplastic [Sorghum bicolor] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811RQI2 | AIG1-type G domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS56129 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology