HalophFGD

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Basic Information
Locus ID: Chr01G011010
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description: F-box domain
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000001 15570496 15573320 - Chr01G011010
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 32 118 6.54E-5 IPR036047
MobiDBLite mobidb-lite consensus disorder prediction 1 23 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044353667.1 uncharacterized protein LOC123075041 [Triticum aestivum] 0
TrEMBL A0A5J9VG37 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_16239 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.3HG0318930.1.CDS1
Poaceae Lolium multiflorum 8 gene-QYE76_002022, gene-QYE76_002023, gene-QYE76_057913 ...
gene-QYE76_057914, gene-QYE76_057929, gene-QYE76_057930, gene-QYE76_057938, gene-QYE76_057943
Poaceae Oryza sativa 1 LOC_Os10g05500.1
Poaceae Puccinellia tenuiflora 6 Pt_Chr0105279, Pt_Chr0105287, Pt_Chr0105324, Pt_Chr0105325 ...
Pt_Chr0105326, Pt_Chr0107031
Poaceae Sporobolus alterniflorus 2 Chr01G011010, Chr12G025920
Poaceae Thinopyrum elongatum 1 Tel5E01G668600
Poaceae Triticum aestivum 4 TraesCS3B02G528600.1.cds1, TraesCS3D02G477400.1.cds1 ...
TraesCS5A02G426900.1.cds1, TraesCS5B02G428800.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.