Basic Information
Locus ID:
Chr01G009670
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 12038284 | 12043810 | - | Chr01G009670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 335 | 477 | 7.8E-9 | IPR005828 |
| Pfam | PF00083 | Sugar (and other) transporter | 59 | 217 | 5.9E-27 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 8 | 477 | 3.66E-62 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 16 | 478 | 1.1E-79 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 22 | 473 | 35.219028 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 349 | 364 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_002466770.1 | organic cation/carnitine transporter 7 [Sorghum bicolor] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9STG8 | MFS domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_52271 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology