Basic Information
Locus ID:
Chr01G008250
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000001 | 9426856 | 9432135 | + | Chr01G008250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 160 | 254 | 1.0E-32 | IPR002554 |
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 90 | 144 | 5.2E-10 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 160 | 239 | 9.21E-24 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 156 | 255 | 1.4E-33 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 92 | 155 | 8.6E-10 | IPR011989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| Coils | Coil | Coil | 224 | 244 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03470.1 | Protein phosphatase 2A regulatory B subunit family protein. Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa. | 0 |
| RefSeq | XP_008643625.1 | uncharacterized protein LOC100281610 isoform X1 [Zea mays] | 0 |
| O04375 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform OS=Arabidopsis thaliana OX=3702 GN=B'ALPHA PE=1 SV=1 | 0 | |
| TrEMBL | Q0DPL6 | Os03g0681800 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0681800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology