Basic Information
Locus ID:
CglSG0054
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
leucine-rich repeat receptor-like protein kinase At5g49770
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold38 | 2192 | 10730 | - | CglSG0054 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 100,233.80 Da | 33.86 | 93.09 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 597 | 863 | 3.76512E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 592 | 858 | 2.3E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 59 | 2.6E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 364 | 1.55E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 577 | 878 | 2.29E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 181 | 383 | 1.8E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 667 | 876 | 1.6E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 563 | 666 | 1.2E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 180 | 1.8E-41 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 85 | 110 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 158 | 89.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 591 | 864 | 9.1E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 261 | 284 | 5.3 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 591 | 864 | 38.958263 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 711 | 723 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 597 | 619 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010252252.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Nelumbo nucifera] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7ZEX6 | probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Nelumbo nucifera OX=4432 GN=LOC104593886 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology