Basic Information
Locus ID:
Cgl09G2120
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Cell division cycle
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 25911196 | 25917607 | + | Cgl09G2120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 66,656.66 Da | 43.61 | 83.32 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 306 | 576 | 6.35933E-42 | - |
| CDD | cd02021 | GntK | 10 | 143 | 8.65531E-46 | IPR006001 |
| Pfam | PF00400 | WD domain, G-beta repeat | 405 | 440 | 1.3E-6 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 323 | 381 | 1.3E-6 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 542 | 576 | 0.0013 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 453 | 491 | 6.1E-4 | IPR001680 |
| Pfam | PF01202 | Shikimate kinase | 16 | 140 | 1.2E-12 | IPR031322 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 282 | 578 | 8.63E-58 | IPR011047 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 7 | 155 | 3.79E-22 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 6 | 166 | 3.6E-51 | IPR027417 |
| Gene3D | G3DSA:2.130.10.10 | - | 232 | 579 | 1.3E-125 | IPR015943 |
| SMART | SM00320 | WD40_4 | 317 | 356 | 1.2E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 401 | 440 | 9.6E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 271 | 312 | 490.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 494 | 534 | 400.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 449 | 491 | 6.7E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 359 | 396 | 4.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 537 | 576 | 5.5E-6 | IPR001680 |
| TIGRFAM | TIGR01313 | therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family | 10 | 156 | 1.4E-41 | IPR006001 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 408 | 449 | 14.251289 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 544 | 577 | 10.416506 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 544 | 577 | 12.513543 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 324 | 356 | 9.203785 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 324 | 365 | 12.112524 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 408 | 440 | 11.418318 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 563 | 577 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 274 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_018828921.1 | cell division cycle 20.2, cofactor of APC complex-like [Juglans regia] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834H385 | gluconokinase OS=Rhododendron simsii OX=118357 GN=RHSIM_Rhsim03G0220500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology