Basic Information
Locus ID:
Cgl09G2014
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
E3 ubiquitin-protein ligase RING1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 24934138 | 24936547 | - | Cgl09G2014 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 38,976.65 Da | 59.89 | 69.97 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 235 | 277 | 4.38253E-25 | - |
| Pfam | PF14369 | zinc-ribbon | 20 | 52 | 4.6E-9 | IPR039525 |
| Pfam | PF13639 | Ring finger domain | 235 | 277 | 8.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 216 | 283 | 3.3E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 199 | 284 | 2.8E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 236 | 276 | 1.5E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 236 | 277 | 12.282736 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 151 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60360.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_050251318.1 | E3 ubiquitin-protein ligase RZF1 [Quercus robur] | 0 |
| Q94AK4 | E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RF19 | RING-type E3 ubiquitin transferase OS=Carpinus fangiana OX=176857 GN=FH972_015994 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology