Basic Information
Locus ID:
Cgl09G1547
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 21060325 | 21068657 | + | Cgl09G1547 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 88,298.09 Da | 39.18 | 91.50 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 718 | 759 | 3.45942E-23 | - |
| CDD | cd01989 | STK_N | 18 | 167 | 1.12949E-35 | - |
| Pfam | PF04564 | U-box domain | 714 | 783 | 3.6E-16 | IPR003613 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 435 | 684 | 8.1E-34 | IPR001245 |
| SUPERFAMILY | SSF57850 | RING/U-box | 712 | 783 | 5.03E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 410 | 689 | 1.52E-58 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 142 | 3.43E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 503 | 699 | 3.7E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 406 | 502 | 1.4E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 713 | 784 | 1.6E-27 | IPR013083 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 17 | 165 | 9.7E-9 | IPR014729 |
| SMART | SM00504 | Ubox_2 | 717 | 780 | 1.9E-27 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 713 | 784 | 31.492458 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 430 | 696 | 27.962011 | IPR000719 |
| Coils | Coil | Coil | 298 | 353 | - | - |
| Coils | Coil | Coil | 375 | 402 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49060.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_042984371.1 | U-box domain-containing protein 32-like isoform X1 [Carya illinoinensis] | 0 |
| Q94A51 | U-box domain-containing protein 32 OS=Arabidopsis thaliana OX=3702 GN=PUB32 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6RFV6 | RING-type E3 ubiquitin transferase OS=Carpinus fangiana OX=176857 GN=FH972_016261 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology