Basic Information
Locus ID:
Cgl09G1207
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 18290927 | 18291724 | - | Cgl09G1207 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 27,934.23 Da | 65.30 | 68.97 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 75 | 118 | 4.56208E-18 | - |
| Pfam | PF13639 | Ring finger domain | 75 | 118 | 5.4E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 56 | 125 | 2.31E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 51 | 124 | 2.5E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 76 | 117 | 2.3E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 76 | 118 | 13.079398 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 244 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16720.1 | TOXICOS EN LEVADURA 2. RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. | 0 |
| RefSeq | XP_042992066.1 | RING-H2 finger protein ATL2-like [Carya illinoinensis] | 0 |
| Q8L9T5 | RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6RG40 | RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_015425 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology