Basic Information
Locus ID:
Cgl09G1038
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Cell division cycle
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 16628149 | 16629936 | + | Cgl09G1038 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 46,246.45 Da | 43.74 | 79.61 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 217 | 251 | 1.9E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 354 | 387 | 0.0033 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 134 | 192 | 3.0E-7 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 103 | 393 | 3.71E-54 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 43 | 390 | 1.2E-119 | IPR015943 |
| SMART | SM00320 | WD40_4 | 212 | 251 | 4.4E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 305 | 345 | 200.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 260 | 302 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 128 | 167 | 0.011 | IPR001680 |
| SMART | SM00320 | WD40_4 | 170 | 208 | 25.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 348 | 387 | 6.5E-6 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 219 | 251 | 13.883689 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 355 | 388 | 10.284687 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 219 | 251 | 11.497408 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 135 | 167 | 8.913786 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 135 | 176 | 11.744925 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 355 | 388 | 12.346452 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 374 | 388 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33260.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.2) | 0 |
| RefSeq | XP_018828921.1 | cell division cycle 20.2, cofactor of APC complex-like [Juglans regia] | 0 |
| Q9S7I8 | Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A1UYQ1 | Cell division cycle 20.1, cofactor of APC complex OS=Morella rubra OX=262757 GN=CJ030_MR7G026002 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology