Basic Information
Locus ID:
Cgl09G0915
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 14876321 | 14881509 | - | Cgl09G0915 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 62,200.74 Da | 51.23 | 63.39 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 291 | 316 | 6.3E-8 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 370 | 392 | 7.5E-7 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 335 | 359 | 4.2E-7 | IPR001876 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 364 | 397 | 8.11E-6 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 284 | 315 | 2.67E-6 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 329 | 362 | 2.25E-6 | IPR036443 |
| Gene3D | G3DSA:4.10.1060.10 | - | 282 | 316 | 1.5E-14 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 327 | 363 | 1.5E-12 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 364 | 398 | 1.1E-9 | - |
| SMART | SM00547 | zf_4 | 370 | 394 | 4.7E-6 | IPR001876 |
| SMART | SM00547 | zf_4 | 337 | 361 | 7.5E-7 | IPR001876 |
| SMART | SM00547 | zf_4 | 293 | 317 | 4.3E-7 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 291 | 314 | 9.506543 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 368 | 397 | 9.551712 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 335 | 364 | 9.721095 | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 339 | 358 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 295 | 314 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 372 | 391 | - | IPR001876 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 425 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70650.1 | Ran BP2/NZF zinc finger-like superfamily protein. | 0 |
| RefSeq | XP_023910999.1 | uncharacterized protein LOC112022607 [Quercus suber] | 0 |
| TrEMBL | A0A5N6REN9 | Zinc finger protein VAR3, chloroplastic OS=Carpinus fangiana OX=176857 GN=FH972_015014 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology