Basic Information
Locus ID:
Cgl09G0855
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
U-box domain-containing protein 21-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 13643303 | 13644541 | - | Cgl09G0855 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 45,637.67 Da | 41.64 | 102.48 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 6 | 48 | 7.05961E-27 | - |
| Pfam | PF04564 | U-box domain | 3 | 73 | 1.8E-21 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 2 | 78 | 6.36E-29 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 97 | 377 | 1.73E-19 | IPR016024 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 75 | 1.7E-27 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 89 | 388 | 4.1E-19 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 5 | 68 | 5.6E-31 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 1 | 75 | 36.649502 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37490.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_023875034.1 | U-box domain-containing protein 21-like [Quercus suber] | 0 |
| Q5PNY6 | U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6REA9 | RING-type E3 ubiquitin transferase OS=Carpinus fangiana OX=176857 GN=FH972_015053 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology