Basic Information
Locus ID:
Cgl09G0850
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 13551897 | 13559400 | + | Cgl09G0850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 66,497.84 Da | 41.04 | 73.76 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 284 | 310 | 0.037 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 410 | 446 | 4.2E-4 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 207 | 259 | 4.6E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 525 | 560 | 2.9E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 317 | 355 | 0.28 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 399 | 560 | 2.93E-23 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 154 | 446 | 1.01E-46 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 464 | 562 | 6.2E-27 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 144 | 450 | 5.0E-106 | IPR015943 |
| SMART | SM00320 | WD40_4 | 238 | 275 | 0.37 | IPR001680 |
| SMART | SM00320 | WD40_4 | 313 | 355 | 0.0061 | IPR001680 |
| SMART | SM00320 | WD40_4 | 151 | 192 | 61.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 407 | 446 | 1.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 521 | 560 | 3.3E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 197 | 235 | 0.054 | IPR001680 |
| SMART | SM00320 | WD40_4 | 277 | 310 | 2.3 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 528 | 561 | 13.983944 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 414 | 455 | 13.783434 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 288 | 319 | 8.503359 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 203 | 244 | 9.97376 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 528 | 561 | 11.5765 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 414 | 447 | 11.286501 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 547 | 561 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 433 | 447 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 108 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_042953388.1 | protein FIZZY-RELATED 2-like isoform X2 [Carya illinoinensis] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T1NXY3 | ANAPC4_WD40 domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_12G100600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology