Basic Information
Locus ID:
Cgl09G0845
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Mitogen-activated protein kinase kinase kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 13516247 | 13518847 | + | Cgl09G0845 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 43,990.30 Da | 69.50 | 72.35 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2 | 142 | 3.4E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 165 | 3.46E-42 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 157 | 6.0E-39 | - |
| SMART | SM00220 | serkin_6 | 1 | 142 | 5.9E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 142 | 27.651064 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1 | 13 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G67080.1 | mitogen-activated protein kinase kinase kinase 19. member of MEKK subfamily | 0 |
| RefSeq | XP_050260659.1 | mitogen-activated protein kinase kinase kinase 20-like [Quercus robur] | 0 |
| Q9SND6 | Mitogen-activated protein kinase kinase kinase 20 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6QLW2 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_004658 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 9 | AT2G05060.1, AT2G34290.1, AT2G41910.1, AT2G41920.1 ... |
| Brassicaceae | Eutrema salsugineum | 17 | Thhalv10000714m.g.v1.0, Thhalv10012027m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 8 | Sp1g33950.v2.2, Sp2g03310.v2.2, Sp4g12780.v2.2 ... |
| Brassicaceae | Brassica nigra | 17 | BniB01g003760.2N, BniB06g001160.2N, BniB06g001430.2N ... |
| Casuarinaceae | Casuarina glauca | 2 | Cgl09G0332, Cgl09G0845 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.2093 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13161 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-3444 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000016l.86 |