Basic Information
Locus ID:
Cgl09G0714
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 11307537 | 11312921 | - | Cgl09G0714 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.44 | 50,289.99 Da | 44.06 | 114.12 | 0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 34 | 436 | 2.59304E-58 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 75 | 396 | 3.0E-22 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 75 | 440 | 1.7E-36 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 49 | 437 | 8.7E-34 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 34 | 442 | 9.144341 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 92 | 108 | - | IPR005829 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 380 | 403 | 1.5E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 74 | 93 | 1.5E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 105 | 129 | 1.5E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 44 | 60 | 1.5E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 320 | 341 | 1.5E-5 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_018822610.2 | hippocampus abundant transcript-like protein 1 isoform X1 [Juglans regia] | 0 |
| TrEMBL | A0A2I4ET91 | hippocampus abundant transcript-like protein 1 isoform X1 OS=Juglans regia OX=51240 GN=LOC108992481 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology