Basic Information
Locus ID:
Cgl09G0445
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Endochitinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 6641349 | 6646631 | + | Cgl09G0445 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 57,986.06 Da | 24.97 | 56.91 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 306 | 534 | 7.74761E-97 | - |
| CDD | cd00325 | chitinase_GH19 | 77 | 290 | 3.65385E-101 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 19 | 58 | 2.5518E-20 | - |
| Pfam | PF00187 | Chitin recognition protein | 20 | 57 | 2.1E-14 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 76 | 291 | 1.2E-120 | IPR000726 |
| Pfam | PF00182 | Chitinase class I | 305 | 534 | 1.8E-121 | IPR000726 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 20 | 66 | 6.81E-14 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 301 | 540 | 2.53E-104 | IPR023346 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 73 | 291 | 5.91E-98 | IPR023346 |
| Gene3D | G3DSA:3.30.60.10 | - | 18 | 59 | 1.9E-18 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 388 | 443 | 3.5E-115 | - |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 159 | 214 | 1.7E-109 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 76 | 291 | 1.7E-109 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 310 | 540 | 3.5E-115 | - |
| SMART | SM00270 | ChitinBD_3 | 20 | 57 | 2.7E-18 | IPR001002 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 18 | 59 | 11.039977 | IPR001002 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 94 | 116 | - | IPR000726 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 218 | 228 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 30 | 49 | - | IPR018371 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 323 | 345 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 28 | 36 | 1.4E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 36 | 43 | 1.4E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 43 | 50 | 1.4E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_023886131.1 | endochitinase-like [Quercus suber] | 0 |
| P36907 | Endochitinase OS=Pisum sativum OX=3888 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J1BU42 | endochitinase A-like OS=Momordica charantia OX=3673 GN=LOC111005566 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology