Basic Information
Locus ID:
Cgl09G0441
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Endochitinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 6598115 | 6607689 | + | Cgl09G0441 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 66,471.78 Da | 27.26 | 55.89 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 390 | 618 | 3.94013E-106 | - |
| CDD | cd00325 | chitinase_GH19 | 86 | 314 | 2.77764E-107 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 21 | 60 | 1.30791E-17 | - |
| Pfam | PF00182 | Chitinase class I | 389 | 618 | 3.2E-126 | IPR000726 |
| Pfam | PF00182 | Chitinase class I | 85 | 314 | 8.2E-128 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 22 | 59 | 1.2E-13 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 22 | 67 | 1.19E-13 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 81 | 320 | 1.49E-105 | IPR023346 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 385 | 624 | 9.0E-106 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 351 | 380 | 1.57E-7 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 472 | 527 | 2.5E-115 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 20 | 62 | 7.4E-17 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 393 | 624 | 2.5E-115 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 90 | 320 | 2.8E-116 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 338 | 370 | 6.8E-6 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 168 | 223 | 2.8E-116 | - |
| SMART | SM00270 | ChitinBD_3 | 22 | 59 | 3.1E-18 | IPR001002 |
| SMART | SM00270 | ChitinBD_3 | 337 | 370 | 0.33 | IPR001002 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 20 | 61 | 10.841081 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 227 | 237 | - | IPR000726 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 103 | 125 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 32 | 51 | - | IPR018371 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 531 | 541 | - | IPR000726 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 407 | 429 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 45 | 52 | 1.1E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 38 | 45 | 1.1E-5 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 30 | 38 | 1.1E-5 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_022132794.1 | endochitinase A-like [Momordica charantia] | 0 |
| P36907 | Endochitinase OS=Pisum sativum OX=3888 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J1BU42 | endochitinase A-like OS=Momordica charantia OX=3673 GN=LOC111005566 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology