Basic Information
Locus ID:
Cgl09G0317
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 5152239 | 5158511 | + | Cgl09G0317 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 68,788.56 Da | 38.13 | 85.49 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 20 | 124 | 1.32031E-47 | - |
| Pfam | PF00651 | BTB/POZ domain | 28 | 116 | 1.4E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 210 | 464 | 4.0E-89 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 21 | 114 | 6.04E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 12 | 119 | 3.2E-13 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 210 | 488 | 87.377876 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 97 | 10.799049 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 613 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_023891364.1 | BTB/POZ domain-containing protein NPY2-like isoform X2 [Quercus suber] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QPH2 | NPH3 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_004639 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology