Basic Information
Locus ID:
Cgl09G0235
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Belongs to the disease resistance NB-LRR family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 4036733 | 4041703 | + | Cgl09G0235 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 115,361.01 Da | 47.49 | 104.33 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 5 | 97 | 2.9E-9 | IPR002182 |
| Pfam | PF13855 | Leucine rich repeat | 231 | 291 | 1.8E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 171 | 594 | 3.85E-32 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 9 | 108 | 1.01E-10 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 662 | 929 | 1.6E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 793 | 992 | 9.9E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 559 | 1.6E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 11 | 94 | 9.2E-17 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 574 | 792 | 1.8E-8 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53350.1 | Disease resistance protein (CC-NBS-LRR class) family. | 0 |
| RefSeq | XP_035538954.1 | uncharacterized protein LOC109021335 isoform X2 [Juglans regia] | 0 |
| P0C8S1 | Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RPP8L2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5N6QSI5 | NB-ARC domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_006504 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology