Basic Information
Locus ID:
Cgl09G0213
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 3516460 | 3530193 | + | Cgl09G0213 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.21 | 167,280.05 Da | 39.55 | 103.57 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 160 | 390 | 6.7E-35 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 461 | 901 | 6.12E-29 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 888 | 1176 | 1.96E-6 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1112 | 1324 | 5.65E-12 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 138 | 404 | 1.18E-43 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 502 | 915 | 2.0E-34 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 148 | 299 | 2.0E-26 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 304 | 392 | 9.8E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 954 | 1349 | 1.2E-17 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 176 | 191 | 8.4E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 337 | 351 | 8.4E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 619 | 635 | 8.4E-17 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 249 | 263 | 8.4E-17 | - |
| Coils | Coil | Coil | 33 | 60 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_041020983.1 | uncharacterized protein LOC121262542 [Juglans microcarpa x Juglans regia] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QSI5 | NB-ARC domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_006504 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology