Basic Information
Locus ID:
Cgl08G2460
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 27549499 | 27551709 | + | Cgl08G2460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 38,219.37 Da | 33.76 | 91.96 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 3 | 168 | 3.08135E-68 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 194 | 349 | 2.3349E-80 | - |
| Pfam | PF00190 | Cupin | 10 | 157 | 7.9E-30 | IPR006045 |
| Pfam | PF00190 | Cupin | 198 | 335 | 5.1E-24 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 16 | 341 | 7.04E-54 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 4 | 190 | 2.0E-33 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 191 | 352 | 7.7E-52 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 191 | 335 | 3.6E-19 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 2.4E-33 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 207 | 227 | 3.8E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 254 | 270 | 3.8E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 290 | 308 | 3.8E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 272 | 287 | 3.8E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 312 | 329 | 3.8E-16 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_010098386.1 | glutelin type-D 1 [Morus notabilis] | 0 |
| Q9ZWA9 | 12S seed storage protein CRD OS=Arabidopsis thaliana OX=3702 GN=CRD PE=1 SV=1 | 0 | |
| TrEMBL | A0A660KXY0 | 11S globulin OS=Carpinus fangiana OX=176857 GN=FH972_011318 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology