Basic Information
Locus ID:
Cgl08G2234
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 25270787 | 25273124 | - | Cgl08G2234 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 31,908.98 Da | 56.52 | 71.94 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 2 | 158 | 5.4E-70 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 83 | 156 | 4.0E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 1 | 82 | 1.1E-33 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 282 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_023897050.1 | ubiquitin fusion degradation protein 1 homolog isoform X1 [Quercus suber] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8J4RC67 | Ubiquitin fusion degradation protein 1 homolog OS=Castanea mollissima OX=60419 GN=CMV_006036 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology