Basic Information
Locus ID:
Cgl08G2163
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 24563146 | 24566579 | - | Cgl08G2163 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 34,575.29 Da | 37.69 | 85.93 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00139 | Legume lectin domain | 218 | 310 | 8.2E-20 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 174 | 3.71E-26 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 201 | 306 | 6.01E-22 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 41 | 8.3E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 42 | 176 | 4.3E-21 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 216 | 309 | 1.6E-20 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_050290643.1 | L-type lectin-domain containing receptor kinase SIT2-like [Quercus robur] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A1UL55 | L-type lectin-domain containing receptor kinase IV.2 OS=Morella rubra OX=262757 GN=CJ030_MR0G006607 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G2069 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G2155, Cgl08G2163 |