Basic Information
Locus ID:
Cgl08G2162
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 24561523 | 24562958 | - | Cgl08G2162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 53,612.14 Da | 42.02 | 90.28 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 166 | 369 | 1.5E-39 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 3 | 91 | 3.8E-20 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 3 | 188 | 3.7E-32 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 146 | 449 | 2.95E-67 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 106 | 1.8E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 242 | 447 | 2.7E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 150 | 241 | 2.0E-32 | - |
| SMART | SM00220 | serkin_6 | 165 | 430 | 3.4E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 165 | 439 | 31.354172 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 171 | 195 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53810.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_042960078.1 | L-type lectin-domain containing receptor kinase SIT2-like [Carya illinoinensis] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2N9FMS0 | Protein kinase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16277 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G2067 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl08G2162, Cgl08G2165 |