Basic Information
Locus ID:
Cgl08G2160
Species & Taxonomic ID:
Casuarina glauca & 3522
Genome Assembly:
GCA_028551395.1
Description:
protein catabolic process in the vacuole
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 24518620 | 24520351 | - | Cgl08G2160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.18 | 29,920.17 Da | 36.79 | 92.99 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00139 | Legume lectin domain | 3 | 57 | 3.8E-10 | IPR001220 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 112 | 259 | 1.2E-30 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 87 | 262 | 6.23E-49 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 3 | 56 | 9.84E-12 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 66 | 1.7E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 186 | 263 | 1.3E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 93 | 185 | 7.0E-27 | - |
| SMART | SM00220 | serkin_6 | 109 | 264 | 1.3E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 109 | 264 | 27.015034 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 230 | 242 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 115 | 139 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53810.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_050290701.1 | L-type lectin-domain containing receptor kinase SIT2-like isoform X4 [Quercus robur] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2N9FMU4 | Protein kinase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16272 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah001977 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30267630 |
| Brassicaceae | Brassica nigra | 1 | BniB02g024140.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G2160 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_007504 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G400000 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2BG084160 |